Software

    All the softwares and user manuals can be found in github:


  • - IDP 0.1.9 - Isoform Detection and Prediction

  • - NP-SMLR - Nucleosome Positioning detection by Single-Molecule Long-Read sequencing

  • - IDP-ASE - haplotyping and quantifying allele-specific expression from Second Generation Sequencing and PacBio sequencing

  • - IDP-fusion 1.1.1 - Isoform Detection and Prediction for Fusion Genes

  • - LSC 2.0 - Rapid error correction tool for PacBio data

  • - SpliceMap 3.3.5.2 - De novo splice junction discovery and alignment tool

  • - AlignQC 1.2 - assessing an alignment and generating reports that are easy to share

  • - IDP-denovo 0.2 - a tool for de novo transcriptome assembly and isoform annotation by hybrid sequencing

  • - GenoCone 0.1 - a tool for subclone inference and studying tumor heterogenity
  • © Kin Fai Au. All Rights Reserved.
  • The Ohio State University, OH 43210.