Contact Information

Site Map

• Home Page
• Publications
• Lab Members
• Utilities
• Contact

Software

• IDP - Isoform Detection and Prediction
  IDP 0.1.8 (notes)
• IDP-ASE - IDP for Allele-Specific Expression
  IDP-ASE 20161017 (notes)
• IDP-fusion - Fusion Isoform Detection and Prediction
  IDP-fusion 1.1.1 (notes)
• LSC - Rapid error correction tool for PacBio data
  LSC 2.0 (notes)
• SpliceMap - De novo splice junction discovery and alignment tool
  SpliceMap 3.3.5.2 (notes)
• AlignQC - Alignment quality control reporting tool
  AlignQC 1.2 (notes)
• IDP-denovo - de novo transcriptome assembly and annotation tool
  IDP-denovo 0.2 (notes)
• GenoClone - Reveal tumor heterogeneity
  GenoCone 0.1 (notes)

Useful links

• Au Lab - Au Lab homepage

• SpliceMap - Novel splice junction discovery

• LSC - Error correction of PacBio long reads

• IDP - Isoform Detection and Prediction

• IDP-ASE - Determine haplotypes and quantify allele specific expression

• IDP-Fusion - Isoform Detection and Prediction across fusion genes

• hESC transcriptome - hESC transcriptome by IDP

• AlignQC - Check an alignment, assess error patterns, and make reports

• IDP-denovo - de novo transcriptome assembly and annotation

• GenoClone - Reveal tumor heterogeneity

• Au lab scripts - Public repository of Au lab scripts and utilities

• © Kin Fai Au. All Rights Reserved.
• The Ohio State University, OH 43210.