Latest News: IDP-denovo_v.1 is released read more

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Copyright and installation instructions are contained within the package. We strongly recommend that you consult the tutorial before attempting to use IDP.

IDP-denovo 20160516

Please see the release notes for more information

IDP-denovo is for de novo transcriptome assembly and isoform annotation by hybrid sequencing.

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Current release

• IDP-denovo 0.2 (notes)

Useful links

• Au Lab - Au Lab homepage

• SpliceMap - Novel splice junction discovery

• LSC - Error correction of PacBio long reads

• IDP - Isoform Detection and Prediction

• IDP-ASE - Determine haplotypes and quantify allele specific expression

• IDP-Fusion - Isoform Detection and Prediction across fusion genes

• hESC transcriptome - hESC transcriptome by IDP

• AlignQC - Check an alignment, assess error patterns, and make reports

• IDP-denovo - de novo transcriptome assembly and annotation

• GenoClone - Reveal tumor heterogeneity

• Au lab scripts - Public repository of Au lab scripts and utilities

• © Kin Fai Au. All Rights Reserved.
• The Ohio State University, OH 43210.