• IDP-denovo is a tool for de novo transcriptome assembly and isoform annotation by hybrid sequencing.

Latest News: IDP-denovo_v.1 is released read more

How does IDP-denovo work?

IDP-denovo perfroms de novo transcriptome assembly by integrating long reads and short reads, followed by isoform annotation and quantification.

IDP-denovo complements the strengths of long reads and short reads and thus characterizes comprehensive transcriptome with high accuracy, which is demonstrated by human data

If you are having trouble running IDP-denovo, please let us know.