IDP-ASE

  • IDP-ASE is a tool for haplotyping and quantifying allele-specific expression
    from Second Generation Sequencing and PacBio sequencing.
  •  
  •     

Latest News: IDP-ASE_20161017 is released read more

This setup guide is in progress. For now see the Github.

Step 1 - install julia 0.47

Step 2 - From Julia's command line run

 Pkg.clone("git://github.com/bdeonovic/IDPASE.jl.git") 

Step 3 - Install Bedtools

Step 4 - Prepare necessary input files