• AlignQC is a tool for assessing an alignment,
    and generating reports that are easy to share

Latest News: AlignQC is released read more


Copyright and installation instructions are contained within the package. We recommend that you consult the readme before attempting to use AlignQC.

AlignQC-1.2.tar.gz Please see the release notes for more information

11-29-2016 - AlignQC version 1.2

This patch provides numerous performance improvements.

  • 1. Bug fixed where entire header of fasta files was read as the name. Now first non-whitespace characters are used to improve compatability with aligners..
  • 2. Numerous performance improvements have greatly improved speeds and lowered memory requirements.
  • 3. Fixed graphical bug in the transcript table.
  • 4. Distribution of distances of observed junction boundaries from near-by reference boundaries is shown in the "error" analysis.